Skip to main content


Springer Nature is making SARS-CoV-2 and COVID-19 research free. View research | View latest news | Sign up for updates

Fig. 1 | BMC Genomics

Fig. 1

From: Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses

Fig. 1

ML tree (model: GTR + I + R2, where “R” means free rate model) based on concatenation of the unicopy data set (1785 genes), with clades zoomed to the right. Ancestral area reconstruction at each node is presented (highly probable ancestral states for nodes discussed in the main text are highlighted, with text color matching state color). “r/m” values correspond to the relative probabilities of a site being altered due to recombination relative to mutation (i.e., r/m = 1.0 means a random site is equaly probable to have suffered recombination or mutation), as obtained in ClonalFrameML

Back to article page