BMC Genomics

Table 1 Sample sizes and summary genetic diversity statistics for samples of Saccostrea echinata at a 594 base pair region of mitochondrial COI. Significance (P < 0.05) is indicated by bold values

From: Mitochondrial and nuclear genetic analyses of the tropical black-lip rock oyster (Saccostrea echinata) reveals population subdivision and informs sustainable aquaculture development

	PRL	MLK	ANR	WGU	MRN	NHL	BKD	UMB	BWN	NUM	ALL
N _COI	34	31	16	37	30	30	21	30	15	29	273
h (± SD)	0.954 ± 0.018	0.951 ± 0.021	1.000 ± 0.022	0.955 ± 0.016	0.966 ± 0.018	0.913 ± 0.030	0.895 ± 0.038	0.901 ± 0.034	0.571 ± 0.149	0.887 ± 0.041	0.949 ± 0.006
N _h	19	18	16	19	20	13	9	15	6	14	74
ph	5	3	4	3	5	5	0	7	3	9	n.a.
S	22	25	23	26	29	18	14	20	5	14	72
π (± SD)	0.006 ± 0.001	0.006 ± 0.001	0.008 ± 0.001	0.007 ± 0.001	0.008 ± 0.001	0.005 ± 0.001	0.007 ± 0.001	0.005 ± 0.001	0.001 ± 0.001	0.004 ± 0.000	0.006 ± 0.000
Tajima’s D	−0.999	−1.656	−1.138	−1.157	−1.382	−0.998	0.419	−1.473	−1.451	− 1.090	−2.030
P _TD	0.176	0.033	0.098	0.126	0.069	0.154	0.693	0.053	0.080	0.144	0.000
Fu’s Fs	−9.364	−10.084	−13.421	−7.789	−10.731	−3.831	−0.361	−6.940	−3.235	−7.186	−25.638
P _Fs	0.000	0.001	0.000	0.001	0.001	0.033	0.450	0.001	0.000	0.000	0.000

N_COI, sample size; h (± SD), haplotype diversity (± standard deviation); N_h, number of haplotypes; ph, number of private haplotypes; S, number of polymorphic sites; π (± SD), nucleotide diversity (± standard deviation); P_TD, probability of Tajima’s D; P_Fs, Probability of Fu’s Fs. PRL, Pirlangimpi; MLK, Milikapiti; ANR, Anuru Bay; WGU, Wigu; MRN, Mooroongga Island; NHL, Nhulunbuy; BKD, Bukudal; UMB, Umbakumba; BWN, Bowen; NUM, Noumea

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ISSN: 1471-2164

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