Skip to main content

Table 1 Sample sizes and summary genetic diversity statistics for samples of Saccostrea echinata at a 594 base pair region of mitochondrial COI. Significance (P < 0.05) is indicated by bold values

From: Mitochondrial and nuclear genetic analyses of the tropical black-lip rock oyster (Saccostrea echinata) reveals population subdivision and informs sustainable aquaculture development

  PRL MLK ANR WGU MRN NHL BKD UMB BWN NUM ALL
N COI 34 31 16 37 30 30 21 30 15 29 273
h (± SD) 0.954 ± 0.018 0.951 ± 0.021 1.000 ± 0.022 0.955 ± 0.016 0.966 ± 0.018 0.913 ± 0.030 0.895 ± 0.038 0.901 ± 0.034 0.571 ± 0.149 0.887 ± 0.041 0.949 ± 0.006
N h 19 18 16 19 20 13 9 15 6 14 74
ph 5 3 4 3 5 5 0 7 3 9 n.a.
S 22 25 23 26 29 18 14 20 5 14 72
π (± SD) 0.006 ± 0.001 0.006 ± 0.001 0.008 ± 0.001 0.007 ± 0.001 0.008 ± 0.001 0.005 ± 0.001 0.007 ± 0.001 0.005 ± 0.001 0.001 ± 0.001 0.004 ± 0.000 0.006 ± 0.000
Tajima’s D −0.999 −1.656 −1.138 −1.157 −1.382 −0.998 0.419 −1.473 −1.451 − 1.090 −2.030
P TD 0.176 0.033 0.098 0.126 0.069 0.154 0.693 0.053 0.080 0.144 0.000
Fu’s Fs −9.364 −10.084 −13.421 −7.789 −10.731 −3.831 −0.361 −6.940 −3.235 −7.186 −25.638
P Fs 0.000 0.001 0.000 0.001 0.001 0.033 0.450 0.001 0.000 0.000 0.000
  1. NCOI, sample size; h (± SD), haplotype diversity (± standard deviation); Nh, number of haplotypes; ph, number of private haplotypes; S, number of polymorphic sites; π (± SD), nucleotide diversity (± standard deviation); PTD, probability of Tajima’s D; PFs, Probability of Fu’s Fs. PRL, Pirlangimpi; MLK, Milikapiti; ANR, Anuru Bay; WGU, Wigu; MRN, Mooroongga Island; NHL, Nhulunbuy; BKD, Bukudal; UMB, Umbakumba; BWN, Bowen; NUM, Noumea