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Fig. 4 | BMC Genomics

Fig. 4

From: Single Cell Explorer, collaboration-driven tools to leverage large-scale single cell RNA-seq data

Fig. 4

Cell type and feature discovery. Step #1: Load 2D embedding map. Step #2 Use a freehand tool to select the cells of interest. Step #3: Compare the differentially expressed genes of selected cells with all unselected cells. Step #4: Interactively visualize gene expression levels using the resulting table. Step #5: Record cell types and marker genes for future reference. Step #6: Position the newly-labelled cells on the map and compare with other specific cell types

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