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Fig. 4 | BMC Genomics

Fig. 4

From: Genomic content of chemosensory genes correlates with host range in wood-boring beetles (Dendroctonus ponderosae, Agrilus planipennis, and Anoplophora glabripennis)

Fig. 4

Phylogenetic tree of the sensory neuron membrane protein (SNMP) family. The protein sequences included were from Dendroctonus ponderosae (Dpon, red), Agrilus planipennis (Apla, blue), Anoplophora glabripennis (Agla, green), Tribolium castaneum (Tcas, orange), and Drosophila melanogaster (Dmel, black). The tree is based on a MAFFT alignment, constructed using FastTree, and rooted with the lineage of Croquemort (Crq) proteins, which are non-SNMP members of the CD36 family. Numbers at nodes are local support values, calculated using the Shimodaira-Hasegawa (SH) test implemented in FastTree. Exact SH values are shown if > 0.7, whereas SH values for all branches are indicated by the colored circles; support increases with the size and brightness of the circles. The sources of sequence data and explanation of receptor suffixes are detailed in the Methods section

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BMC Genomics

ISSN: 1471-2164

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