Table 1 Summary of the genomes and annotation of nine Virgibacillus strains
From: Mining biosynthetic gene clusters in Virgibacillus genomes
Strain | Isolation site | Number of ORFs | Genome size (Mb) | GC% | Number of scaffolds | Genomic Islands % | # of rRNAs | # of tRNAs | # of unique genes |
|---|---|---|---|---|---|---|---|---|---|
Virgibacillus sp. SK37 (Genbank accession number: CP007161) | Fish sauce mash | 3795 | 3.84 | 37.59 | 4 | 4.9 | 21 | 53 | 504 |
Virgibacillus halodenitrificans PDB-F2 (Genbank accession number: CP017962) | Solid waste landfill | 3820 | 3.92 | 37.43 | 2 | 2.8 | 24 | 62 | 255 |
Virgibacillus phasianinus LM2416 (Genbank accession number: CP022315) | Host Lophura swinhoei | 3966 | 4.07 | 39.50 | 1 | 4.1 | 21 | 64 | 648 |
Virgibacillus necropolis LMG 19488 (Genbank accession number: CP022437) | Mural paintings | 4135 | 4.34 | 37.30 | 1 | 2.2 | 22 | 62 | 761 |
Virgibacillus dok0064onensis 21D (Genbank accession number: CP018622) | Marine | 3939 | 4.26 | 36.60 | 1 | 5.4 | 18 | 63 | 435 |
Virgibacillus sp. 6R (Genbank accession number: CP017762) | Coal bed | 4313 | 4.75 | 37.30 | 1 | 5.9 | 18 | 65 | 927 |
Virgibacillus halodenitrificans Bac324 (Genbank accession number: CP033049) | Mangrove mud/Rabigh Harbour Lagoon | 4284 | 4.06 | 37.2 | 2 | 5.19 | 24 | 62 | 665 |
Virgibacillus sp. Bac332 (Genbank accession number: CP033046) | mangrove mud | 4424 | 4.56 | 36.7 | 2 | 9.32 | 18 | 63 | 958 |
Virgibacillus dokdonensis Bac330 (Genbank accession number: CP033048) | Mangrove mud | 4163 | 4.46 | 36.8 | 1 | 6.9 | 18 | 64 | 619 |