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Fig. 3 | BMC Genomics

Fig. 3

From: The recombination-cold region as an epidemiological marker of recombinogenic opportunistic pathogen Mycobacterium avium

Fig. 3

Chromosomal loci carrying lineage-specific alleles. a Maximum likelihood tree based on the MAH_0788 ortholog alignment. GTR + G was used as the model. Truncated entries were removed upon construction of the tree, b Polymorphic sites in the alignment of MAH_0788 orthologs. Variation was not detected among the members of SC2 and SC4, c Maximum likelihood tree based on the alignment of the MAV_1375 ortholog. GTR + G was used as the model, d Selected polymorphic sites in the alignment of the MAV_1375 ortholog

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BMC Genomics

ISSN: 1471-2164

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