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Table 1 Statistics of output sequencing in Clerodendrum inerme

From: RNA-Seq analysis of Clerodendrum inerme (L.) roots in response to salt stress

Samples Reads (No.) Clean reads (No.) Bases (bp) Clean data (bp) N (%) Q20 (%)
0 h-1 60,802,270 60,008,714 9,120,340,500 8,912,712,572 0.00139 97.57
0 h-2 57,493,894 56,789,814 8,624,084,100 8,431,598,540 0.001364 97.69
0 h-3 56,866,282 55,934,266 8,529,942,300 8,313,133,758 0.002491 96.21
6 h-1 55,327,066 54,686,334 8,299,059,900 8,098,537,576 0.001451 97.79
6 h-2 55,683,662 55,033,118 8,352,549,300 8,155,979,860 0.001475 97.8
6 h-3 58,976,774 58,281,832 8,846,516,100 8,646,526,566 0.001437 97.73
24 h-1 60,813,298 60,098,036 9,121,994,700 8,903,035,660 0.001583 97.79
24 h-2 57,868,180 57,194,542 8,680,227,000 8,506,194,364 0.001434 97.72
24 h-3 58,931,324 58,021,340 8,839,698,600 8,634,386,222 0.002948 96.11
72 h-1 55,592,334 54,926,346 8,338,850,100 8,166,663,782 0.001337 97.57
72 h-2 57,207,480 56,526,470 8,581,122,000 8,408,351,478 0.001331 97.53
72 h-3 57,107,008 56,448,116 8,566,051,200 8,386,908,366 0.00143 97.63
  1. Reads (No.) = total number of reads. Clean reads (No.) = number of high quality sequence reads. Bases (bp) = total number of bases. Clean data = number of high quality sequence bases. The Q20 percentage is the proportion of nucleotides with a quality value > 20. N (%) = the proportion of unknown nucleotides in clean reads