Table 2 Summary of the transcriptome assembly and quality assessment
Prior to de novo assembly | |
 Length of raw reads (bp) | 75 |
 Total number of raw reads | 522,296,142 |
 Length of trimmed reads (bp) | 65 |
 Total number of trimmed reads | 501,900,423 (96.09%) |
 Total number of normalized reads | 51,971,920 (10.36%) |
After de novo assembly | |
 Total number of contigs | 109,616 |
 Total number of unigenes | 96,362 |
 Mean length of unigenes (bp) | 776.73 |
 N50 length of unigenes (bp) | 1308 |
 Highest ExN50 value (% Ex) | 94 |
 Fragment mapping rate (%) | 96.85% |
 BUSCO completeness (%) | 83.4% |