Table 3 Summary of the transcriptome assembly, annotation and differential abundance analysis
Total number of contigs | 109,616 |
|---|---|
Total number of unigenes | 96,362 |
NCBI Nr annotated | 32,523 (33.75%) |
UniProt annotated | 25,761 (26.73%) |
GO annotated | 18,291 (18.98%) |
EggNOG annotated | 20,130 (20.88%) |
KEGG annotated | 19,715 (20.46%) |
Differentially abundant gene (total) | 5538 (FDR < 0.05, LogFC < ±1) |
Up-regulated gene | 2413 |
Down-regulated gene | 3125 |