Skip to main content

Table 4 List of DEG transcripts involved in immune system

From: Transcriptomic analysis of Macrobrachium rosenbergii (giant fresh water prawn) post-larvae in response to M. rosenbergii nodavirus (MrNV) infection: de novo assembly and functional annotation

Unigene

Functional annotation

Organisms

FC

Antiviral protein

 DN14192_c1_g1_i2

antiviral protein

Litopenaeus vannamei

2.48

Antimicrobial protein

 DN46855_c0_g1_i1

anti-lipopolysaccharide factor

Macrobrachium rosenbergii

2.25

 DN3291_c0_g1_i1

anti-lipopolysaccharide factor 1

Macrobrachium rosenbergii

2.73

 DN34234_c0_g1_i1

anti-lipopolysaccharide factor 3

Macrobrachium rosenbergii

4.20

 DN9599_c0_g1_i3

crustin 7, partial

Macrobrachium rosenbergii

6.59

 DN584_c0_g1_i2

crustin 6, partial

Macrobrachium rosenbergii

3.48

 DN2919_c0_g1_i1

crustin 5

Macrobrachium rosenbergii

3.05

 DN13113_c0_g1_i1

i-type lysozyme-like protein 2

Penaeus monodon

−2.45

 DN5315_c0_g1_i1

crustin A

Litopenaeus vannamei

−8.94

 DN25544_c0_g1_i1

crustin 4

Panulirus japonicus

−2.25

Pattern recognition proteins (PRPs)

 DN27838_c0_g1_i1

C-type lectin

Procambarus clarkii

3.29

 DN3149_c0_g1_i3

C-type lectin 1

Palaemon modestus

3.46

 DN25495_c0_g1_i4

C-type lectin 2

Marsupenaeus japonicus

4.32

 DN39427_c0_g1_i1

C-type lectin 4

Fenneropenaeus merguiensis

−2.91

 DN8487_c0_g1_i1

C-type lectin H

Eriocheir sinensis

−3.05

 DN79_c0_g1_i9

C-type lectin-like domain-containing protein PtLP

Portunus trituberculatus

2.58

 DN9664_c0_g1_i1

C-type lectin-like protein

Fenneropenaeus chinensis

−4.08

 DN1597_c0_g1_i2

down syndrome cell adhesion molecule

Cherax quadricarinatus

−2.03

 DN1969_c0_g1_i12

ficolin

Macrobrachium nipponense

2.55

 DN458_c0_g1_i6

ficolin-like protein 2

Pacifastacus leniusculus

3.32

 DN2732_c0_g1_i1

lectin

Macrobrachium rosenbergii

2.41

 DN22168_c0_g1_i1

lectin 1

Macrobrachium rosenbergii

2.36

 DN1016_c0_g1_i2

lectin 2

Macrobrachium rosenbergii

3.56

 DN2249_c0_g1_i2

lectin 3

Macrobrachium rosenbergii

2.28

 DN248_c1_g1_i2

lectin B isoform 2, partial

Marsupenaeus japonicus

2.13

 DN59056_c0_g1_i1

lectin D, partial

Marsupenaeus japonicus

2.45

 DN11184_c0_g1_i1

lectin E

Marsupenaeus japonicus

2.68

 DN15806_c0_g1_i1

mannose-binding protein

Procambarus clarkii

−6.02

 DN51_c0_g1_i3

tachylectin

Macrobrachium rosenbergii

2.17

Toll-IMD signaling pathway

 DN1501_c0_g4_i1

spatzle protein, partial

Fenneropenaeus chinensis

−17.88

 DN6896_c0_g2_i1

toll-receptor 9

Penaeus monodon

3.81

 DN48150_c0_g1_i1

Nuclear factor NF-kappa-B p110 subunit

Nicrophorus vespilloides

4.69

RNAi pathway

 DN14942_c0_g1_i2

dicer-2

Macrobrachium rosenbergii

3.66

 DN13890_c0_g1_i2

argonaute-3

Macrobrachium rosenbergii

2.16

Prophenol oxidase system (ProPO)

 DN24054_c0_g1_i2

prophenoloxidase, partial

Macrobrachium rosenbergii

2.01

 DN9200_c0_g1_i1

prophenoloxidase-activating enzyme 2a

Penaeus monodon

2.99

 DN27498_c0_g1_i2

prophenoloxidase activating factor 1

Scylla paramamosain

2.31

 DN6266_c0_g1_i1

prophenoloxide activating enzyme III

Macrobrachium rosenbergii

2.23

Serine proteinase cascade

 DN449_c1_g1_i1

serine proteinase

Scylla paramamosain

2.51

 DN11492_c0_g1_i8

serine proteinase stubble

Lucilia cuprina

−6.73

 DN833_c0_g1_i2

serine proteinase inhibitor 6

Penaeus monodon

−2.48

 DN2466_c0_g1_i2

alpha-2-macroglobulin

Macrobrachium rosenbergii

−2.68

 DN17466_c0_g1_i2

pacifastin heavy chain

Macrobrachium rosenbergii

2.14

Ubiquitin proteasome pathway

 DN49814_c0_g5_i1

E3 ubiquitin-protein ligase Ubr3

Copidosoma floridanum

2.22

 DN8249_c1_g1_i1

E3 ubiquitin-protein ligase RNF216-like, partial

Hyalella azteca

3.89

 DN10760_c0_g1_i3

ubiquitin

Papilio xuthus

−4.89

 DN1685_c0_g1_i9

RING finger protein nhl-1-like

Limulus polyphemus

3.63

Antioxidant system

 DN6006_c0_g2_i1

Microsomal glutathione S-transferase 1

Penaeus monodon

2.01

 DN19734_c0_g1_i1

glutathione peroxidase 3

Penaeus monodon

4.08

 DN8125_c0_g1_i2

selenium independent glutathione peroxidase

Penaeus monodon

−2.20

 DN27870_c0_g2_i3

copper/zinc superoxide dismutase isoform 3

Marsupenaeus japonicus

−13.45

 DN29677_c0_g1_i1

thioredoxin

Macrobrachium nipponense

−2.16

Blood coagulation

 DN49188_c0_g1_i1

transglutaminase

Macrobrachium rosenbergii

2.08

 DN2823_c0_g1_i2

hemicentin-1-like isoform X2

Pieris rapae

5.31

Apoptosis

 DN370_c0_g1_i2

caspase

Eriocheir sinensis

2.64

 DN12951_c0_g1_i2

caspase 4

Portunus trituberculatus

3.76

 DN21090_c0_g1_i2

inhibitor of apoptosis protein

Scylla paramamosain

2.79

Phagocytosis

 DN57596_c0_g2_i1

Ras-related protein Rab-37

Zootermopsis nevadensis

2.66

 DN13418_c0_g1_i1

Rab32

Macrobrachium rosenbergii

2.46

 DN19755_c0_g3_i1

rac GTPase-activating protein 1-like

Centruroides sculpturatus

2.95

 DN13060_c0_g1_i1

VLIG2

Macrobrachium rosenbergii

3.92

 DN147_c0_g2_i3

VLIG1

Macrobrachium rosenbergii

2.89

 DN18093_c0_g1_i3

ADP-ribosylation factor

Marsupenaeus japonicus

2.19

 DN27087_c0_g1_i2

interferon regulatory factor

Litopenaeus vannamei

3.32

Other immune genes

 DN8990_c0_g1_i3

Ferritin

Macrobrachium rosenbergii

2.93

 DN39999_c0_g1_i6

calcium/calmodulin-dependent protein kinase type II alpha chain isoform X6

Zootermopsis nevadensis

2.19

 DN47919_c0_g1_i9

integrin, partial

Procambarus clarkii

2.53

 DN17544_c0_g2_i1

integrin alpha 8

Fenneropenaeus chinensis

2.55

 DN11203_c0_g4_i1

integrin alpha 4, partial

Fenneropenaeus chinensis

2.04

 DN2727_c0_g1_i3

Cathepsin B

Macrobrachium rosenbergii

2.69

 DN928_c0_g1_i2

cathepsin C

Fenneropenaeus chinensis

2.50

 DN12284_c0_g1_i1

cathepsin L

Marsupenaeus japonicus

2.66

 DN1236_c0_g1_i6

crustacyanin-like lipocalin

Macrobrachium rosenbergii

−2.10

 DN18816_c0_g2_i1

crustacyanin A, partial

Penaeus monodon

−2.48