Table 2 Summary of in silico annotation of Fasciola gigantica unigenes (58,422; > 1 FPKM across three biological replicates)
In silico database | Number of transcripts |
|---|---|
NCBI Non-redundant (Nr) database | 30201 (51.7%) |
NCBI Nucleotide (Nt) database | 6673 (11.4%) |
KEGG (KO) database | 11165 (19.1%) |
PFAM database | 22591 (38.7%) |
Gene Ontology | 22633 (38.7%) |
 Biological Process | 16554 (28.3%) |
 Cellular Component | 12067 (20.7%) |
 Molecular Function | 18658 (31.9%) |
SwissProt database | 18783 (32.1%) |
KOG database | 12316 (22.8%) |
Annotated by all databases | 1326 (2.3%) |
Annotated by at least one database | 34600 (59.2%) |