Skip to main content

Table 1 Significant brain mi-eQTL and their characteristics

From: Insight into genetic regulation of miRNA in mouse brain

miRNA

eQTL

chr

eQTL

location (Mb)

eQTL

95% C.I.

eQTL

LOD

Genome-wide

p-value

FDR

Cis/trans

mmu-miR-8114

1

154.3

(152.9, 154.9)

10.11

0.0010

0.0251

C

mmu-miR-32-3p

1

171.8

(171.1, 174.1)

5.51

0.0010

0.0251

T

mmu-miR-1981-3p

1

187.2

(183, 188.7)

7.63

0.0010

0.0251

C

mmu-miR-205-5p

1

193.6

(192.5, 193.6)

6.38

0.0010

0.0251

C

mmu-miR-669o-5p

2

9.8

(5.6, 10.9)

5.32

0.0020

0.0463

C

mmu-miR-467e-5p

2

10.6

(3.2, 10.9)

5.49

0.0010

0.0251

C

mmu-miR-669a-5p

2

10.6

(8.1, 10.9)

6.29

0.0010

0.0251

C

mmu-miR-297b-5p

2

10.6

(10.6, 10.9)

5.83

0.0020

0.0463

C

mmu-miR-7674-5p

2

32.8

(32.8, 34.6)

6.77

0.0010

0.0251

C

mmu-miR-466q

3

28.4

(28, 28.9)

18.86

0.0010

0.0251

C

novel:chr4_9669

4

43.1

(32, 43.1)

12.41

0.0010

0.0251

C

novel:chr4_11381

4

87.1

(87.1, 87.2)

23.47

0.0010

0.0251

C

mmu-miR-9769-3p

7

30.6

(30.6, 30.6)

25.92

0.0010

0.0251

C

mmu-miR-5121

7

43.5

(40.3, 45.5)

17.25

0.0010

0.0251

C

mmu-miR-7057-5p

7

64.6

(57, 67.1)

24.43

0.0010

0.0251

C

novel:chr8_23508

8

125.5

(125.4, 125.6)

21.89

0.0010

0.0251

C

novel:chr9_24385

9

77.3

(77.3, 77.3)

19.99

0.0010

0.0251

C

novel:chr4_10452

9

100.3

(94, 113.4)

5.78

0.0010

0.0251

T

novel:chr10_26214

10

4.8

(4, 5.6)

32.53

0.0010

0.0251

C

mmu-miR-6905-5p

10

25.3

(24.8, 25.9)

12.75

0.0010

0.0251

C

novel:chr10_26328

10

25.3

(24.8, 25.9)

20.74

0.0010

0.0251

C

mmu-miR-1934-5p

11

69.0

(67.8, 69.7)

20.39

0.0010

0.0251

C

mmu-miR-193a-3p

11

74.3

(74.3, 79.5)

7.29

0.0010

0.0251

T

mmu-miR-8103

11

95.1

(95.1, 99.6)

8.04

0.0010

0.0251

C

mmu-miR-152-5p

11

96.2

(93.4, 103.4)

6.33

0.0010

0.0251

C

mmu-miR-677-5p

11

98.3

(96.4, 101)

20.81

0.0010

0.0251

T

mmu-miR-5621-5p

11

115.6

(115.4, 116)

25.18

0.0010

0.0251

C

mmu-miR-208b-3p

14

54.7

(54.6, 55)

9.32

0.0010

0.0251

C

novel:chr15_40280

15

94.8

(94.8, 95.5)

8.10

0.0010

0.0251

C

mmu-miR-6516-5p

16

45.7

(45.7, 51.5)

5.94

0.0020

0.0463

T

mmu-miR-381-5p

16

45.8

(45.7, 51.5)

5.59

0.0010

0.0251

T

mmu-miR-6929-3p

19

30.0

(29.3, 30.5)

7.46

0.0010

0.0251

T

mmu-miR-3086-5p

19

30.2

(29.3, 30.5)

5.06

0.0010

0.0251

T

mmu-miR-201-5p

X

66.6

(65.4, 66.6)

8.63

0.0010

0.0251

C

mmu-miR-465c-5p

X

66.6

(65.4, 82.2)

5.44

0.0010

0.0251

C

mmu-miR-547-3p

X

66.6

(65.4, 66.6)

9.58

0.0010

0.0251

C

mmu-miR-871-3p

X

66.6

(49, 67.4)

6.28

0.0010

0.0251

C

mmu-miR-881-3p

X

66.6

(65.4, 67.4)

6.13

0.0010

0.0251

C

  1. Abbreviations: Chr Chromosome, pos Position, Mb Megabase, C.I. Bayes’ credible interval, LOD Logarithm of the odds score, FDR False Discovery Rate, cis/trans cis (within 5 Mb on either side of the associated SDP) or trans (indicated by C or T)