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Fig. 7 | BMC Genomics

Fig. 7

From: Rapid adaptation of signaling networks in the fungal pathogen Magnaporthe oryzae

Fig. 7

RNA-sequencing (Seq) data processing. a Principal component analysis results. The figure displays a three-dimensional scatter plot of the first three principal components (PCs) of the data. Each point represents an RNA-Seq sample. Samples with similar gene expression profiles are clustered together. Sample groups are indicated by using different colors as indicated in the legend provided. b Heat map of transcriptional regulation patterns of the wildtype strain, ΔMohog1 and ΔMohog1(adapted) after 25 min salt stress (Clustergrammer analysis). The figure contains a heat map displaying the expression profile of the top 500 differential expression genes (DEGs) for each sample in the RNA-Seq dataset. The set of mutant strains ΔMohog1 and ΔMohog1(adapted) prior and after salt stress was compared to wildtype strain 70–15 (indicated in the figure as sample group) for perturbation contrast. Each row of the heat map represents a gene, each column represents a sample and each cell displays normalized gene expression values

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