Table 1 LncRNAs significantly associated with the MSI in the training cohort
From: A gastric cancer LncRNAs model for MSI and survival prediction based on support vector machine
Gene stable ID version | Gene stable ID | Transcript stable ID | Gene name | Gene description | Transcript name | P-value |
|---|---|---|---|---|---|---|
ENSG00000229175.1 | ENSG00000229175 | ENST00000427918 | LINC00382 | long intergenic non-protein coding RNA 382 [Source:HGNC Symbol;Acc:HGNC:42709] | LINC00382-201 | 0.0901 |
ENSG00000231125.2 | ENSG00000231125 | ENST00000457162 | AF129075.1 | novel transcript, sense intronic to CCT8 | AF129075.1-201 | 0.091 |
ENSG00000231394.1 | ENSG00000231394 | ENST00000449899 | AC099681.2 | novel transcript | AC099681.2-201 | 0.009 |
ENSG00000236457.1 | ENSG00000236457 | ENST00000413674 | AC090617.1 | novel transcript, sense intronic to SMG6 | AC090617.1-201 | 0.005 |
ENSG00000237200.1 | ENSG00000237200 | ENST00000438551 | ZBTB40-IT1 | ZBTB40 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41493] | ZBTB40-IT1-201 | < 0.001 |
ENSG00000237923.1 | ENSG00000237923 | ENST00000442852 | LINC02570 | long intergenic non-protein coding RNA 2570 [Source:HGNC Symbol;Acc:HGNC:39766] | LINC02570-206 | 0.132 |
ENSG00000253567.1 | ENSG00000253567 | ENST00000523935 | AC025871.1 | novel transcript | AC025871.1-201/AC025871.1-202 | 0.104 |
ENSG00000261117.1 | ENSG00000261117 | ENST00000569860 | AC009486.1 | novel transcript | AC009486.1-201 | 0.045 |
ENSG00000261501.1 | ENSG00000261501 | ENST00000567769 | AC079341.1 | novel transcript | AC079341.1-201 | 0.219 |
ENSG00000263904.1 | ENSG00000263904 | ENST00000581134 | AC015563.1 | novel transcript, sense intronic to FAM59A | AC015563.1-201 | 0.15 |
ENSG00000272562.1 | ENSG00000272562 | ENST00000609423 | AL512343.2 | novel transcript, antisense to H3F3A | AL512343.2-201 | 0.010 |
ENSG00000175061.13 | ENSG00000175061 | ENST00000484836 | LRRC75A-AS1 | LRRC75A antisense RNA 1 | – | < 0.001 |
ENSG00000221571.2 | ENSG00000221571 | ENST00000609276 | RNU6ATAC35P | RNA, U6atac small nuclear 35, pseudogene | – | 0.005 |
ENSG00000226673.1 | ENSG00000226673 | ENST00000427276 | LINC01108 | long intergenic non-protein coding RNA 1108 | – | 0.253 |
ENSG00000232732.5 | ENSG00000232732 | ENST00000601136 | AC097717.1 | novel transcript | – | 0.045 |
ENSG00000251538.1 | ENSG00000251538 | ENST00000511194 | LINC02201 | long intergenic non-protein coding RNA 2201 | – | 0.109 |