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Table 3 Virulence factors predicted with VFDB database

From: Horizontal gene transfer contributes to virulence and antibiotic resistance of Vibrio harveyi 345 based on complete genome sequence analysis

Virulence factor Annotation Chromosome Identity genus
Adherence
acfA ACF II Vibrio
IlpA IlpA I Vibrio
VP1611 MAM7 I Vibrio
mshH, mshI, mshI, mshJ, mshK, mshL, mshM, mshN, mshE, MSHA type IV pilus I, II Vibrio
mshG, mshF, mshA, mshD, mshA, mshA, mshA, mshA,    
ompU OmpU I Vibrio
aatC, aatC TCP II Escherichia
flp-1, flp-1,tadB, tadC, tadA, flp, rcpC, rcpA, tadZ, tadA, Flp type IV pili I, II Vibrio, Aggregatibacter
tadB, tadC, tadD, tadE, tadF, tadG, rcpA, tadA    
vfr, rpoN, rpoS, pilW, fimT, pilE, pilM, pilN, pilO, pilP, type IV pili I, II Vibrio, Pseudomonas, Salmonella,
pilQ, pilT, pilU, pilF, pilT, pilR, pilR, pilR, pilW, pilA,    Dichelobacter, Yersinia, Haemophilus
pilR, pilR, pil, R, pilD, pilC, pilB    
CJJ81176_1161, CFF8240_1412, CFF8240_1412, LOS I, II Campylobacter, Haemophilus
C8J_1080, kdsB, lpxK, msbA, kdsA, lpxC, gmhA/lpcA,    
htrB, lgtF, lgtF,opsX/rfaC, kdkA,msbB, rfaD, orfM, htrB,    
galE, lpxA, lpxB,gmhA/lpcA, htrB, lpxH, yhxB/manB,    
galE, msbA, rfaE, neuC1, lpxD    
tuf, tuf EF-Tu I Mycoplasma
htpB Hsp60 I Legionella
lap Listeria adhesion protein I Listeria
CT396, CT396 MOMP I Chlamydia
Motility
flaD, flaA, flaL, flaK, flaJ, flaI, flaH, flaG, flaF, flaE, Flagella I, II Vibrio, Pseudomonas, Salmonella,
flaD, flaC, flaB, cheR, cheA, cheB, cheV, cheV, cheW,    Legionella, Aeromonas, Pseudomonas
cheW, cheY, cheZ, filM,flaB, flaD, flaD, flaE, flaG, flaI,    
fleQ, fleQ, fleR, flgA, flgA, flgB, flgC, flgD, flgE,    
flgF, flgG, flgH, flgI, flgJ, flgK, flgL, flgM, flgM flgN,    
flgN, flgO, flgP, flgT, flhA, flhA, flhB, flhB, flhF, flhG,    
fliA, fliD, fliE, fliE, fliF, fliF, fliG, fliG, fliH, fliH, fliI,    
fliI, fliJ, fliJ, fliK, fliL, fliM, fliN, fliN, fliO, fliP, fliP,    
fliQ, fliQ, fliR, fliR, fliS, fliY, flmH, flmH, flmH, flrA,    
flrB, flrC, lafA, lafB, lafC, lafD, lafE, lafF, lafK,    
lafS, lafU/motB, lafW, motA, motA, motB, motX, motY,    
motY, scrA, scrB, scrC, scrG, B565_1123    
Regulation
luxS, adeG AI-2 I, II Vibrio, Acinetobacter
cqsA CAI-1 II Vibrio
Secretion system
epsA, epsB, epsC, epsE, epsF, epsG, epsH, epsI, epsJ, EPS T2SS I Vibrio
epsK, epsL, epsM, epsN, gspD    
exsA, exsD, sycN, tyeA, vcrD, vcrG, vcrH, vcrR, vcrV, T3SS1 I Vibrio
vecA, virG, vopB, vopD, vopN, vopQ, vopR, vscB, vscC,    
vscD, vscF, vscG, vscH, vscI, vscJ, vscK, vscL, vscN,    
vscO, vscQ, vscR, vscS, vscT, vsxU, vscX, vscY, vscC    
hopAJ2, hopJ1, mlr6326, ati2, ati1 Other T3SS I, II Pseudomonas, Mesorhizobium, Aeromonas
lpg2936, trwD, virB1, virB10, CbuK_1823, CbuG_0575, T4SS I, II Legionella, Bartonella, Brucella, Coxiella
CbuG_1738, COXBURSA331_A0369    
PFLU6009, Psyr_2628, clpV1, pppA, clpV1, Psyr_2628, T6SS I, II Pseudomonas, Burkholderia, Citrobacter,
tssH/clpV/bscF, cts2A, lip2, impB, impB, impC, impC    Agrobacterium
Toxin
secA2 Ace I Mycobacterium
tlh Thermolabile hemolysin II Vibrio (Vibrio parahaemolyticus)
clbQ, clbM, clbL, clbI, clbH, clbF, clbE, clbD, clbC Colibactin I Escherichia
vctA Enterobactin II Vibrio
ast Enterotoxin I Aeromonas
Immune evasion
ABK1_0097, ABK1_0097, BC5270, BC5275, BC5275, Capsule I, II Vibrio, Staphylococcus, Mycoplasma,
BCE_5384, cap8J, cpsA, cpsB, cpsB, cpsC, cpsD, cpsE,    Enterococcus, Acinetobacter, Neisseria,
cpsF, cpsG, cpsJ, eps9, eps9, kpsF, kpsF, oppF, oppF,    Enterococcus, Campylobacter, Burkholderia,
oppF, rmlB, rmlD, sicC/synD, uppS, wbfB, wbfV/wcvB,    Bacillus
wcbN, wecA, wza, wzb, wzc    
fabZ, acpXL, kbtB, waaZ, waaF, gtrB LPS I Brucella, Helicobacter, Pseudomonas, Shigella
ACICU_00876, ASA_0824, ASA_3329, cbsB, ccmA, ccmB, Iron uptake I, II Vibrio, Acinetobacter, Aeromonas,
ccmC,ccmE, ccmF, ccmF, chuY, ciuD, fur, hemA, hemB,    Burkholderia, Dickeya, Escherichia,
hemC, hemE, hemG, hemH, hemL, hemN, hemN, hitA, hitB,    Haemophilus, Legionella, Mycobacterium,
hitC, hitC, hmuU, hutA, huvB, huvC, huvD, huvX, huvZ,    Pseudomonas, Salmonella, Shigella,
iutA, mbtI, orbG, orbH, pchH, phuV, PSEEN2499, psuA, pvdH,    Yersinia
pvsA, pvsB, pvsC, pvsD, pvsE, pvuA, pvuB, pvuC, pvuD,    
pvuE, sitA, sitB, sitC, sitD, vabC, vctC, vctC, vctD, vctD,    
vctG, vctG, vctP, viuC    
Antiphagocytosis
algB, algW, algW, algU, mucP, algR Alginate I, II Pseudomonas
pgi, mrsA/glmM Exopolysaccharide I Haemophilus
hasD, hasB, hasF Hyaluronic acid capsule I, II Pseudomonas, Serratia, Yersinia
katA, katA, clpC, clpE, clpP, ctpV, ibpA, msrA/B (pilB), Stress protein I, II Neisseria, Listeria, Mycobacterium,
regX3, regX3, sodB, sodB, sodC1    Legionella, Salmonella
Exoenzyme
icl Isocitratase I Mycobacterium
mip, mip Mip I, II Legionella
Regulation    Mycobacterium, Legionella, Salmonella
mprA, mprA, mprA, relA, rpoS, csrA, sigA Regulation I  
Efflux pump
mtrD MtrCDE I Neisseria
panC Metabolic adaptation   Mycobacterium
Others
csgD, csgD, glnA1, ML1683, ML1683, leuD, MGA_1142, Others   
ipaH, ECS88_3547, ndk, pdhB, ppsE, cysC1, argK, eno, plr/gapA,   I, II Vibrio, Acinetobacter, Escherichia,
hpt, sugC, sugC, sugC, sugC, sugC, trpD, bfmR, bfmR, bfmR, bfmR,    Listeria, Mycobacterium, Mycoplasma,
vibD, vibE, vibA, VVA1298, VVA1298, VVA1298, vctP    Pasteurella, Pseudomonas, Salmonella,
    Shigella, Streptococcus