Table 4 Antimicrobial resistance genes predicted with the ARDB database
Gene_id | Identity (%) | Resistance_Type | Antibiotic_Resistance | Description |
|---|---|---|---|---|
CU052_02205 | 47.53 | pbp2 | penicillin | penicillin-binding protein 2 |
CU052_02455 | 99.35 | tet34 | tetracycline | oxytetracycline resistance phosphoribosyltransferase domain-containing protein Tet(34) |
CU052_03895 | 47.65 | tolc | aminoglycoside, glycylcycline, macrolide, beta_lactam,acriflavin | outer membrane channel protein TolC |
CU052_04185 | 67.79 | ksga | kasugamycin | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA |
CU052_04200 | 40.24 | dfra26 | trimethoprim | type 3 dihydrofolate reductase |
CU052_05755 | 49.16 | mexw | – | multidrug efflux RND transporter permease subunit |
CU052_07910 | 46.51 | pbp1a | penicillin | PBP1A family penicillin-binding protein |
CU052_09355 | 42.63 | pbp1b | penicillin | penicillin-binding protein 1B |
CU052_09890 | 49.11 | pbp2 | penicillin | penicillin-binding protein 2 |
CU052_13950 | 51.93 | adeb | chloramphenicol, aminoglycoside | multidrug efflux RND transporter permease subunit |
CU052_15205 | 98.25 | norm | tigecycline, streptomycin, kanamycin, ciprofloxacin, norfloxacin | MATE family efflux transporter |
CU052_15655 | 43.59 | emre | aminoglycoside | QacE family quaternary ammonium compound efflux SMR transporter |
CU052_16225 | 48.04 | bcr | – | Bcr/CflA family drug resistance efflux transporter |
CU052_21770 | 40.74 | ykkc | na_antimicrobials | QacE family quaternary ammonium compound efflux SMR transporter |
CU052_23115 | 43.06 | ceob | chloramphenicol | multidrug efflux RND transporter permease subunit |
CU052_25305 | 44.41 | emrd | – | multidrug transporter EmrD |
CU052_26580 | 43.94 | catb5 | chloramphenicol | antibiotic acetyltransferase |
CU052_27055 | 58.33 | qnra | fluoroquinolone | Qnr family pentapeptide repeat protein |
CU052_27855 | 62.23 | mdtl | chloramphenicol | multidrug transporter MdtL |
CU052_28095 | 100 | tetm | tetracycline | tetracycline resistance ribosomal protection protein Tet(M) |
CU052_28120 | 100 | tetb | tetracycline | tetracycline efflux MFS transporter Tet(B) |
CU052_28525 | 67.43 | qnrs | fluoroquinolone | quinolone resistance pentapeptide repeat protein QnrVC6 |
CU052_28540 | 64.47 | dfra17 | Trimethoprim | trimethoprim-resistant dihydrofolate reductase DfrA |
CU052_29140 | 100 | sul2 | sulfonamide | sulfonamide-resistant dihydropteroate synthase Sul2 |