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Table 6 Analysis of the agreement between genotyping and phenotyping using the CMES 480 isolate

From: Association mapping of a locus that confers southern stem canker resistance in soybean and SNP marker development

SNP

Pos (bp)

Accuracy (%)

Recall (%)

Type I Error Rate (%)

Type II Error Rate (%)

 

GBSRdm?370

1,744,370

98.0

98.0

2.4

1.18

 
  1. Pos Position of the identified SNP in base pairs (bp); Accuracy (%):the percentage of resistant and susceptible genotypes correctly classified by the marker; Recall (%): a value given by the number of true positives divided by the number of true positives plus the number of false negatives; Type I error rate (%): false-positive rate; Type II error rate (%): false-negative rate
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BMC Genomics

ISSN: 1471-2164

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