Table 3 Concordance of the WGS serotyping method and other serotyping methods
From: Genomic characterization of Haemophilus influenzae: a focus on the capsule locus
Serotype* | Concordance: SAST and WGS | Concordance: rt-PCR and WGS | ||||
|---|---|---|---|---|---|---|
Total Isolates | No. of Concordant Isolates | Percent | Total Isolates | No. of Concordant Isolates | Percent | |
a | 67 | 67 | 100.0 | 64 | 64 | 100.0 |
b | 49 | 49 | 100.0 | 46 | 46 | 100.0 |
c | 9 | 9 | 100.0 | 9 | 9 | 100.0 |
d | 8 | 8 | 100.0 | 8 | 8 | 100.0 |
e | 131 | 131 | 100.0 | 122 | 122 | 100.0 |
f | 131 | 131 | 100.0 | 131 | 131 | 100.0 |
NT | 293 | 292 | 99.7 | 116 | 116 | 100.0 |
Total | 688 | 687 | 99.9 | 496 | 496 | 100.0 |