Table 3 The top-ten significant enriched KEGG pathways involving DEGs under Cd stress
From: Transcriptomic analysis of Verbena bonariensis roots in response to cadmium stress
Regulation | Pathway term | Rich factor | FDR | Gene number |
|---|---|---|---|---|
Up-regulated | Glutathione metabolism | 0.223529 | 2.42E-10 | 133 |
Citrate cycle (TCA cycle) | 0.226221 | 3.80E-07 | 88 | |
Phenylpropanoid biosynthesis | 0.179342 | 9.83E-07 | 158 | |
Proteasome | 0.233974 | 1.13E-06 | 73 | |
Carbon fixation in photosynthetic organisms | 0.180113 | 0.000261 | 96 | |
Glycolysis / Gluconeogenesis | 0.157366 | 0.001086 | 141 | |
Flavone and flavonol biosynthesis | 0.377778 | 0.00125 | 17 | |
Galactose metabolism | 0.169091 | 0.001704 | 93 | |
Glyoxylate and dicarboxylate metabolism | 0.172632 | 0.002082 | 82 | |
alpha-Linolenic acid metabolism | 0.180723 | 0.004917 | 60 | |
Down-regulated | Photosynthesis - antenna proteins | 0.675676 | 2.18E-35 | 75 |
Photosynthesis | 0.345 | 1.82E-19 | 69 | |
Glycerophospholipid metabolism | 0.16109 | 6.45E-12 | 130 | |
Glycerolipid metabolism | 0.179704 | 6.71E-10 | 85 | |
Carotenoid biosynthesis | 0.193133 | 3.94E-06 | 45 | |
Ether lipid metabolism | 0.181818 | 3.94E-06 | 50 | |
Circadian rhythm - plant | 0.178439 | 9.42E-06 | 48 | |
Starch and sucrose metabolism | 0.112982 | 4.09E-05 | 161 | |
Vitamin B6 metabolism | 0.301587 | 4.65E-05 | 19 | |
Plant hormone signal transduction | 0.108998 | 0.000395 | 149 |