Fig. 2
From: Hecaton: reliably detecting copy number variation in plant genomes using short read sequencing data
Performance of Delly, LUMPY, Manta, and GRIDSS on data simulated from diploid rearranged tomato genomes. Performance metrics are reported as the mean over all 10 simulations with error bars depicting the standard error of the mean. The size distributions of the detected false positives are depicted as box plots. The overall precision of Delly, LUMPY, and Manta was low (a) and false positives generally consisted of large CNVs having a size of several tens of Mbs (b). These corresponded to pairs of large deletions and tandem duplications that covered the sequence located between the template sequence and insertion sites of intrachromosomal dispersed duplications