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Table 4 Overlap of filtered CNVs with repeats, genes, and coding sequences (CDS) in tomato samples

From: Hecaton: reliably detecting copy number variation in plant genomes using short read sequencing data

SampleSequenceRepeatsGenesCDS
 covered (Mb)(% of total)(% of total)(% of total)
PI1587600.2164.912.382.32
LA27060.4675.5912.471.73
TR000031.5984.019.381.89
LA44511.2176.2611.781.11
LA21578.5982.7911.011.25
LA071612.1185.4712.191.29
LYC412.1381.5313.411.04