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Table 1 TCP gene family in grapevine

From: Genome-wide identification and transcript analysis of TCP transcription factors in grapevine

Gene Name Accession number Protein Chrom Chr srart Chr end MW(Da) pI Aliphatic index GRAVY Loc
VvTCP1 VIT_01s0011g0292.t01 438 Chr1 2,574,244 2,575,738 48,349.63 9.43 69.04 −0.562 nucl: 7.5, golg: 5, cyto_nucl: 4.5
VvTCP2 VIT_01s0026g0220.t01 353 Chr1 11,610,314 11,611,375 38,054.39 8.93 62.49 −0.627 nucl: 13
VvTCP3 VIT_02s0025g0459.t01 411 Chr2 4,140,127 4,141,512 43,499.20 6.20 69.59 −0.296 nucl: 13
VvTCP4 VIT_08s0040g0160.t01 204 Chr8 12,723,686 12,724,300 21,699.26 8.46 60.83 −0.507 nucl: 6, mito: 6, cyto: 2
VvTCP5 VIT_10s0003g0087.t01 382 Chr10 2,112,286 2,113,434 42,398.40 6.40 76.65 −0.519 nucl: 10, chlo: 1, cyto: 1
VvTCP6 VIT_10s0003g0391.t01 444 Chr10 6,666,048 6,667,382 48,535.28 7.84 58.02 −0.873 nucl: 13
VvTCP7 VIT_10s0042g0017.t01 255 Chr10 12,942,744 12,943,511 26,159.42 9.71 73.29 −0.234 nucl: 7, chlo: 3, mito: 3
VvTCP8 VIT_12s0028g0252.t01 307 Chr12 3,281,712 3,282,899 33,699.77 6.41 74.04 −0.386 nucl: 11, chlo: 2
VvTCP9 VIT_12s0035g0069.t01 460 Chr12 20,150,532 20,151,914 48,077.84 6.57 56.37 −0.668 nucl: 14
VvTCP10 VIT_14s0083g0015.t01 388 Chr14 22,124,744 22,125,983 44,040.07 9.57 68.43 −0.672 nucl: 10.5, cyto_nucl: 6.5, chlo: 2
VvTCP11 VIT_14s0068g0033.t01 349 Chr14 24,046,932 24,047,981 38,623.45 8.79 76.50 −0.573 nucl: 10.5, nucl_plas: 6, chlo: 1
VvTCP12 VIT_14s0068g0169.t01 296 Chr14 25,396,768 25,397,658 31,511.13 9.01 68.95 −0.625 nucl: 12, chlo: 1
VvTCP13 VIT_15s0048g0115.t01 339 Chr15 15,268,480 15,269,562 36,052.01 8.96 72.92 −0.343 nucl: 11, cyto: 2
VvTCP14 VIT_16s0022g0248.t01 169 Chr16 15,211,547 15,212,056 17,721.95 6.62 80.36 −0.307 nucl: 10, cyto: 3
VvTCP15 VIT_17s0000g0418.t01 366 Chr17 4,344,260 4,345,620 41,570.75 8.88 66.69 −0.757 nucl: 8, cyto: 3, chlo: 1
VvTCP16 VIT_17s0000g0602.t01 369 Chr17 6,588,791 6,589,900 39,568.76 7.20 58.73 −0.640 nucl: 14
VvTCP17 VIT_18s0117g0030.t01 355 Chr18 23,608,849 23,609,916 37,106.80 6.09 60.82 −0.555 nucl: 14
VvTCP18 VIT_19s0014g0168.t01 398 Chr19 1,805,797 1,806,993 43,306.70 6.27 58.19 −0.695 nucl: 14
  1. AA amino acid residues, Chrom chromosome, MW molecular weight, pI theoretical isoelectric point, GRAVY grand average of hydropathicity, Loc subcellular location. The subcellular location results of grapevine BBX genes were predicted by WoLF PSORT (https://www.genscript.com/wolf-psort.html). Nucl nucleus, Chlo chloroplast, Cyto cytosol, Mito mitochondria. Testk used for kNN is: 14