Table 1 TCP gene family in grapevine
From: Genome-wide identification and transcript analysis of TCP transcription factors in grapevine
Gene Name | Accession number | Protein | Chrom | Chr srart | Chr end | MW(Da) | pI | Aliphatic index | GRAVY | Loc |
|---|---|---|---|---|---|---|---|---|---|---|
VvTCP1 | VIT_01s0011g0292.t01 | 438 | Chr1 | 2,574,244 | 2,575,738 | 48,349.63 | 9.43 | 69.04 | −0.562 | nucl: 7.5, golg: 5, cyto_nucl: 4.5 |
VvTCP2 | VIT_01s0026g0220.t01 | 353 | Chr1 | 11,610,314 | 11,611,375 | 38,054.39 | 8.93 | 62.49 | −0.627 | nucl: 13 |
VvTCP3 | VIT_02s0025g0459.t01 | 411 | Chr2 | 4,140,127 | 4,141,512 | 43,499.20 | 6.20 | 69.59 | −0.296 | nucl: 13 |
VvTCP4 | VIT_08s0040g0160.t01 | 204 | Chr8 | 12,723,686 | 12,724,300 | 21,699.26 | 8.46 | 60.83 | −0.507 | nucl: 6, mito: 6, cyto: 2 |
VvTCP5 | VIT_10s0003g0087.t01 | 382 | Chr10 | 2,112,286 | 2,113,434 | 42,398.40 | 6.40 | 76.65 | −0.519 | nucl: 10, chlo: 1, cyto: 1 |
VvTCP6 | VIT_10s0003g0391.t01 | 444 | Chr10 | 6,666,048 | 6,667,382 | 48,535.28 | 7.84 | 58.02 | −0.873 | nucl: 13 |
VvTCP7 | VIT_10s0042g0017.t01 | 255 | Chr10 | 12,942,744 | 12,943,511 | 26,159.42 | 9.71 | 73.29 | −0.234 | nucl: 7, chlo: 3, mito: 3 |
VvTCP8 | VIT_12s0028g0252.t01 | 307 | Chr12 | 3,281,712 | 3,282,899 | 33,699.77 | 6.41 | 74.04 | −0.386 | nucl: 11, chlo: 2 |
VvTCP9 | VIT_12s0035g0069.t01 | 460 | Chr12 | 20,150,532 | 20,151,914 | 48,077.84 | 6.57 | 56.37 | −0.668 | nucl: 14 |
VvTCP10 | VIT_14s0083g0015.t01 | 388 | Chr14 | 22,124,744 | 22,125,983 | 44,040.07 | 9.57 | 68.43 | −0.672 | nucl: 10.5, cyto_nucl: 6.5, chlo: 2 |
VvTCP11 | VIT_14s0068g0033.t01 | 349 | Chr14 | 24,046,932 | 24,047,981 | 38,623.45 | 8.79 | 76.50 | −0.573 | nucl: 10.5, nucl_plas: 6, chlo: 1 |
VvTCP12 | VIT_14s0068g0169.t01 | 296 | Chr14 | 25,396,768 | 25,397,658 | 31,511.13 | 9.01 | 68.95 | −0.625 | nucl: 12, chlo: 1 |
VvTCP13 | VIT_15s0048g0115.t01 | 339 | Chr15 | 15,268,480 | 15,269,562 | 36,052.01 | 8.96 | 72.92 | −0.343 | nucl: 11, cyto: 2 |
VvTCP14 | VIT_16s0022g0248.t01 | 169 | Chr16 | 15,211,547 | 15,212,056 | 17,721.95 | 6.62 | 80.36 | −0.307 | nucl: 10, cyto: 3 |
VvTCP15 | VIT_17s0000g0418.t01 | 366 | Chr17 | 4,344,260 | 4,345,620 | 41,570.75 | 8.88 | 66.69 | −0.757 | nucl: 8, cyto: 3, chlo: 1 |
VvTCP16 | VIT_17s0000g0602.t01 | 369 | Chr17 | 6,588,791 | 6,589,900 | 39,568.76 | 7.20 | 58.73 | −0.640 | nucl: 14 |
VvTCP17 | VIT_18s0117g0030.t01 | 355 | Chr18 | 23,608,849 | 23,609,916 | 37,106.80 | 6.09 | 60.82 | −0.555 | nucl: 14 |
VvTCP18 | VIT_19s0014g0168.t01 | 398 | Chr19 | 1,805,797 | 1,806,993 | 43,306.70 | 6.27 | 58.19 | −0.695 | nucl: 14 |