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Table 3 Indicator analysis of the taxa for fish families using Mothur

From: Analysis of the fecal microbiota of fast- and slow-growing rainbow trout (Oncorhynchus mykiss)

Fish Family Phylum Class Order Family Genus Abundance Indicator value p-value
1 Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Trueperella 9007 53.15 0.02
  Actinobacteria Actinobacteria Micrococcales Micrococcaceae Kocuria 5226 57.95 0.007
  Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus 1233 68.78 0.02
  Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcaceae_UCG-014 615 65.49 0.03
  Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus 589 73.38 0.015
  Actinobacteria Actinobacteria Propionibacteriales Propionibacteriaceae Propionibacteriaceae 134 52.7 0.02
  Fusobacteria Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium 1048 61.53 0.03
2 Firmicutes Clostridia Clostridiales Peptostreptococcaceae Peptostreptococcus 110 65.57 0.02
  Firmicutes Clostridia Clostridiales Family_XIII Family_XIII_unclassified 86 63.15 0.03
  Bacteroidetes Bacteroidia Bacteroidales Bacteroidales_unclassified Bacteroidales_unclassified 12,125 99.49 0.04
3 Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus 360 70.31 0.019
  Actinobacteria Coriobacteriia Coriobacteriales Atopobiaceae Atopobiaceae_unclassified 196 63.414 0.01
4 Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas 5265 76.19 0.01
  1. p ≤ 0.05 indicates the significant indicator taxa for each fish family