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Table 1 Description of GH3 family putative members identified in C. canephora through in silico analysis

From: Genome-wide analysis, transcription factor network approach and gene expression profile of GH3 genes over early somatic embryogenesis in Coffea spp

Gene Conserved domains (CDD - NCBI) Protein length (aa) Locus ID (Coffee Genome Hub) Chromosome position
CcGH3.1 PLN02247 superfamily/GH3 593 Cc00_g01360 Chr0: 8,822,291 ... 8,824,450
CcGH3.2 PLN02247 superfamily/GH3 583 Cc00_g04490 Chr0: 34,209,474 ... 34,211,882
CcGH3.3 PLN02247 superfamily/GH3 371 Cc00_g04500 Chr0: 34,230,766 ... 34,211,882
CcGH3.4 PLN02247 superfamily/GH3 583 Cc00_g04520 Chr0: 34,265,456 ... 34,267,828
CcGH3.5 PLN02247 superfamily/GH3 583 Cc00_g04530 Chr0: 34,279,931 ... 34,282,340
CcGH3.6 PLN02247 superfamily/GH3 357 Cc00_g04540 Chr0: 34,297,176 ... 34,298,627
CcGH3.7 PLN02247 superfamily/GH3 569 Cc00_g22520 Chr0: 142,656,917 ... 142,659,058
CcGH3.8 PLN02247 superfamily/GH3 348 Cc00_g28980 Chr0: 178,936,581 ... 178,938,006
CcGH3.9 PLN02247 superfamily/GH3 606 Cc01_g20620 Chr1: 37,172,864 ... 37,175,503
CcGH3.10 PLN02247 superfamily/GH3 271 Cc02_g19460 Chr2: 17,549,243 ... 17,550,429
CcGH3.11 PLN02247 superfamily/GH3 236 Cc02_g19470 Chr2: 17,550,591 ... 17,551,298
CcGH3.12 PLN02247 superfamily/GH3 399 Cc02_g39050 Chr2: 53,645,460 ... 53,647,471
CcGH3.13 PLN02247 superfamily/GH3 607 Cc05_g05640 Chr5: 20,228,391 ... 20,230,769
CcGH3.14 PLN02247 superfamily/GH3 591 Cc05_g06700 Chr5: 21,465,217 ... 21,468,524
CcGH3.15 PLN02247 superfamily/GH3 622 Cc05_g12940 Chr5: 26,669,847 ... 26,672,091
CcGH3.16 PLN02247 superfamily/GH3 528 Cc07_g06610 Chr7: 4,821,858 ... 4,824,041
CcGH3.17 PLN02247 superfamily/GH3 583 Cc10_g16320 Chr10: 27,266,812 ... 27,269,856