Fig. 3

a An estimation of ReVac’s CPU time focused on its rate-limiting steps using batches of 1000 and 5000 proteins. Multiple runs (one for each time point on the figure) were submitted in succession on a single host, using increasing amounts of dedicated cores, each running the same batch of the respective 1000 (solid line) or 5000 proteins (dashed line). The total numbers of proteins analyzed using 1 and 48 cores are provided as labels for comparison to (b). b Real-life CPU time estimates derived from the entire ReVac workflow running on 150–300 compute clusters through Ergatis, each utilizing a single host in most cases