Fig. 2
Gene content and structural variability between Zin03 and Cabernet Sauvignon. a. Distribution of structural variation sizes. Boxplots show the 25th quartile, median, and 75th quartile for each type of SV. Whiskers are 1.5Inter-Quartile Range. Diamonds indicate the mean log10(length) of each type of SV; b,c. Selected deletions in Cabernet Sauvignon relative to Zin03 that intersect genes. For each reported deletion, (from top to bottom) the coverage of reads over the region by long Zinfandel and Cabernet Sauvignon reads, haplotype-resolved alignment of the reads, and the genes annotated in the region are shown; b. Two genes are completely deleted in Cabernet Sauvignon relative to Zinfandel and are deleted in one Zinfandel haplotype; c. One gene contains a homozygous partial deletion in Cabernet Sauvignon