Table 1 Statistical summary of raw data, transcriptome assembly, and functional annotation of Sphaerosyllis hystrix and Syllis gracilis
Parameters | Sphaerosyllis hystrix | Syllis gracilis |
|---|---|---|
Raw readsa | 79.5 GB | 74.3 GB |
Total assembled bases | 231,196,267 | 330,068,885 |
Total number of reads | 122,278,261 | 113,602,020 |
Number of clean reads | 102,763,252 | 100,322,750 |
Median contig length (nucleotides) | 405 | 377 |
Average contig length (nucleotides) | 733.43 | 626.48 |
N50 value (nucleotides) | 1158 | 858 |
Total number of transcripts | 315,224 | 526,860 |
Average lenght of transcripts (nucleotides) | 642.64 | 546.32 |
Transcripts with GO annotation | 90,058 | 128,997 |
Predicted proteins | 125,040 | 184,632 |
Trinity ‘genes’ | 179,841 | 309,576 |
Completeness | 97.8% | 98.6% |
Duplicated copies | 73.8% | 80.6% |
Single copies | 24.0% | 18.0% |
Fragmented copies | 1.9% | 1.3% |