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Table 1 Time required to perform in different methods

From: Modification of the genome topology network and its application to the comparison of group B Streptococcus genomes

method

time

GTN (BLAST+MCL)

25.3 h

GTN (CD-HIT+DIAMOND)

30 min

GTN (Roary input)

110 min

SNP

11.6 h

First version of GTN

50 min

  1. The tools in brackets represent different methods for performing gene family assignment
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BMC Genomics

ISSN: 1471-2164

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