TE Class | Number of TE-lncRNAs | % total length of TE-lncRNAs | % total length of TEs in the genome |
---|---|---|---|
Retroelements | |||
 SINE | 15 | 0.36% | 0.02% |
 LINE/L1 | 151 | 1.28% | 0.96% |
 LINE/RTE-BovB | 8 | 0.05% | 0.14% |
 LTR/Cassandra | 47 | 0.23% | 0.10% |
 LTR/Copia | 3917 | 22.45% | 32.39% |
 LTR/Gypsy | 9566 | 61.53% | 59.64% |
 Total | 13,704 | 85.90% | 93.25% |
DNA transposons | |||
 DNA | 28 | 0.28% | 0.03% |
 DNA/CMC-EnSpm | 579 | 3.97% | 3.33% |
 DNA/hAT-Ac | 234 | 2.03% | 0.73% |
 DNA/hAT-Tag1 | 20 | 0.56% | 0.08% |
 DNA/hAT-Tip100 | 32 | 0.34% | 0.14% |
 DNA/MULE-MuDR | 213 | 1.70% | 0.93% |
 DNA/PIF-Harbinger | 291 | 2.80% | 0.64% |
 DNA/TcMar-Stowaway | 35 | 0.41% | 0.08% |
 Total | 1,432 | 12.10% | 5.96% |
Helitrons | 162 | 1.79% | 0.78% |
Unclassified: | 14 | 0.21% | 0.02% |
Total | 15,312 | Â | Â |