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Table 3 Numbers of differentially expressed genes, lncRNAs and TE-lncRNAs in maize seedlings under abiotic stress

From: Maize transposable elements contribute to long non-coding RNAs that are regulatory hubs for abiotic stress response

Condition/Stage

Heat

Cold

Drought

Salt

UV

Ozone

V3

V4

V6

V3

V4

V3

V6

V3

V4

V6

V4

V6

Up-regulated

2,051

3,279

2,892

1,273

3,161

1,260

2,560

1,292

2,348

3,114

2,752

1,712

 Coding

1,952

3,030

2,681

1,248

2,976

1,233

2,433

1,264

2,264

3,028

2,703

1,660

 lncRNA

84

223

181

23

159

24

112

22

64

74

36

45

 TE-lncRNA

36

92

86

6

64

8

59

5

21

31

13

19

Down-regulated

1,511

3,411

3,407

1,450

2,420

1,543

1,904

1,266

2,944

3,183

2,740

738

 Coding

1,395

3,299

3,209

1,312

2,310

1,414

1,806

1,101

2,894

2,945

2,686

699

 lncRNA

103

97

101

117

93

112

80

150

45

208

42

35

 TE-lncRNA

66

38

118

70

39

63

38

101

15

133

14

15