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Table 3 Annotation of photoperiod pathway-related DEGs identified in pairwise comparisons of stages in developmental aerial stem-to-rhizome transition of Gynostemma pentaphyllum

From: Integrated transcriptome and miRNA analysis uncovers molecular regulators of aerial stem-to-rhizome transition in the medical herb Gynostemma pentaphyllum

Gene IDGene namelog2 Fold ChangeAnnotation
Stage 1 vs Stage 2Stage 2 vs Stage 3Stage 1 vs Stage 3
c62585.graph_c0GpPHYA0.650.851.48aPhytochrome A
c47576.graph_c0GpCOL-a−0.66− 0.90−1.58aCONSTANS-like
c47991.graph_c0GpCOL-b−0.02−1.08a−1.18aCONSTANS-like
c48345.graph_c0GpCOL-c1.000.501.64aCONSTANS-like
c49299.graph_c0GpCOL-d−1.05a−0.18−1.26aCONSTANS-like
c50325.graph_c0GpCOL-e1.17a2.03a3.20aCONSTANS-like
c52252.graph_c0GpCOL-f−0.47−1.50a−2.12aCONSTANS-like
c53693.graph_c0GpCOL-g−0.63−1.87a− 2.62aCONSTANS-like
c62923.graph_c1GpCDF−1.68a−0.18−1.95aCyclic dof factor
c51745.graph_c0GpFKF1−0.151.65a1.55aFlavin-binding kelch repeat F-box protein 1
  1. aDEGs with FDR < 0.01, |log2 fold change| ≥1