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Table 4 Annotation of carbohydrate metabolism-related DEGs identified in pairwise comparisons of stages in developmental aerial stem-to-rhizome transition of Gynostemma pentaphyllum

From: Integrated transcriptome and miRNA analysis uncovers molecular regulators of aerial stem-to-rhizome transition in the medical herb Gynostemma pentaphyllum

Gene ID

Gene name

log2 Fold Change

Annotation

Stage 1 vs Stage 2

Stage 2 vs Stage 3

Stage 1 vs Stage 3

c57893.graph_c0

GpSUS-a

0.44

4.17a

4.62a

Sucrose synthase

c58010.graph_c0

GpSUS-b

0.60

0.59

1.18a

Sucrose synthase

c63160.graph_c0

GpGBSS

0.41

0.73

1.12a

Granule-bound starch synthase

c51009.graph_c0

KING1

1.95a

2.25a

4.23a

SNF1-related protein kinase regulatory subunit gamma-1

c55307.graph_c0

GpCESA-a

3.68a

0.67

4.34a

Cellulose synthase A

c59421.graph_c0

GpCESA-b

3.47a

0.63

4.08a

Cellulose synthase A

c58320.graph_c0

GpCESA-c

1.51a

0.42

1.92a

Cellulose synthase A

  1. aDEGs with FDR <0.01, |log2 fold change| ≥1