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Table 7 List of isolates used in this study and their reported habitat. The four isolates sequenced in the context of this study are in red

From: Comparative genomics applied to Mucor species with different lifestyles

Species

Isolate

Isolation source

Reported habitat of the species

Reported habitat references

Genome reference or accession

CBS 385–95 (UBOCC-A-113049)

Triticum aestivum, leaves

Plant endophyte

[27]

This study

UBOCC-A-109160

Cheese

Cheese

[26]

This study

UBOCC-A-109153

Cheese

Cheese

[26]

This study

UBOCC-A-109155

Cheese

Cheese, yogurt, walnuts, sausages, grassland soil, decaying vegetables, human

[24, 26, 67]

This study

M. griseocyanusa

NBRC 6742

Unknown

Vegetable, tanned sole leather

[68]

BBKB00000000

M. circinelloides f. circinelloides

1006PhL

Skin of a healthy human

Cheese, sufu starter, decaying vegetables, human, soda, air, soil, dung, sediment

[22, 24, 26, 69]

[29]

M. circinelloides

CDC-B8987

Human BL line

[13]

M. lusitanicusb

CBS 277.49 (UBOCC-A-108085)

Unknown

[12]

M. velutinosusc

CDC-B5328

Human: nasal

[13]

M. indicus

CDC-B7402

Human: unknown

Human, dung, Dioscorea tuber, sorghum malt

[24, 70, 71]

[13]

R. microsporus (formerly M. racemosusc)

CDC-B9645

Clean room floor

Human, dust, sorghum malt, stored cereals

[13, 24]

[13]

R. microsporus (formerly M. racemosusc)

CDC-B9738

Human abdomen

GCA_000697275.1

  1. CBS (Centraalbureau voor Schimmelcultures, Netherlands), NBRC (Biological Ressource Center, NITE), NRRL (Agricultural Research Service Culture Collection, USA), CDC (Centers for disease Control and Prevention) and UBOCC (University of Brest Culture Collection)
  2. aOriginally M. ambiguus NBRC 6742. bOriginally M. circinelloides CBS 277.49. These isolates were reassigned according Wagner et al. [4]. cInitially referenced as Mucor racemosus [13] but later assigned to Rhizopus microsporus [25]