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Table 1 Total number of sequenced reads and the mapping percentage of 24 libraries sequenced using Illumina HiSeq 3000

From: Transcriptome profiling of resistance response to Meloidogyne chitwoodi introgressed from wild species Solanum bulbocastanum into cultivated potato

Library name

Total no. of sequenced reads

No. of mapped reads

Percent mapped reads

PA99N82–4_48 hpi_Rep1

36,006,390

28,658,249

79.70%

PA99N82–4_48 hpi_Rep2

32,535,083

23,590,096

72.68%

PA99N82–4_48 hpi_Rep3

32,015,587

24,903,593

77.87%

PA99N82–4_7 dpi_Rep1

29,687,468

20,689,188

69.78%

PA99N82–4_7 dpi_Rep2

32,428,022

18,773,826

57.79%

PA99N82–4_7 dpi_Rep3

38,735,092

24,514,654

63.30%

PA99N82–4_14 dpi_Rep1

35,725,073

26,963,309

75.50%

PA99N82–4_14 dpi_Rep2

37,050,174

27,659,207

74.74%

PA99N82–4_14 dpi_Rep3

33,921,088

28,152,554

83.10%

PA99N82–4_21 dpi_Rep1

34,488,511

29,721,424

86.29%

PA99N82–4_21 dpi_Rep2

35,811,762

29,629,073

82.84%

PA99N82–4_21 dpi_Rep3

34,541,968

28,757,700

83.36%

Russet Burbank_48 hpi_Rep1

37,167,700

30,221,101

81.41%

Russet Burbank_48 hpi_Rep2

33,674,984

26,881,866

79.92%

Russet Burbank_48 hpi_Rep3

37,027,642

30,005,844

81.14%

Russet Burbank_7 dpi_Rep1

32,641,052

23,764,692

72.84%

Russet Burbank_7 dpi_Rep2

28,964,657

23,553,284

81.41%

Russet Burbank_7 dpi_Rep3

28,367,927

21,524,660

75.98%

Russet Burbank_14 dpi_Rep1

38,250,425

32,461,405

84.99%

Russet Burbank_14 dpi_Rep2

36,979,817

32,044,476

86.76%

Russet Burbank_14 dpi_Rep3

33,964,944

27,090,704

79.85%

Russet Burbank_21 dpi_Rep1

27,859,614

24,711,828

88.81%

Russet Burbank_21 dpi_Rep2

33,289,516

28,329,367

85.20%

Russet Burbank_21 dpi_Rep3

33,375,813

28,370,660

85.10%