Table 3 Number of expressed genes (EG) and differentially EGs (DEGs) of each subfamily during the peach fruit ripening process
| Â | S3 | S4I | S4II | S4III | DEGs at least in one stage | ||||
|---|---|---|---|---|---|---|---|---|---|
Subfamily | EG | DEGs | EG | DEGs | EG | DEGs | EG | DEGs | |
RING (338) | 242 (71.60%) | 59 (17.46%) | 244 (72.19%) | 39 (11.54%) | 246 (72.78%) | 37 (10.95%) | 241 (71.30%) | 69 (20.41%) | 119 (35.21%) |
F-box (267) | 122 (45.69%) | 27 (10.11%) | 127 (47.57%) | 17 (6.37%) | 124 (46.44%) | 12 (4.49%) | 124 (46.44%) | 34 (12.73%) | 53 (19.85%) |
BTB (67) | 51 (76.12%) | 8 (11.94%) | 50 (74.63%) | 7 (10.45%) | 54 (80.60%) | 8 (11.94%) | 49 (73.13%) | 13 (19.40%) | 24 (35.82%) |
U-box (54) | 37 (68.52%) | 12 (22.22%) | 40 (74.07%) | 4 (7.41%) | 39 (72.22%) | 6 (11.11%) | 39 (72.22%) | 17 (31.48%) | 23 (42.59%) |
SKP (16) | 8 (50.00%) | 1 (6.25%) | 8 (50.00%) | 0 (0.00%) | 8 (50.00%) | 1 (6.26%) | 8 (50.00%) | 1 (6.26%) | 3 (18.75%) |
Cullin (13) | 9 (69.23%) | 5 (38.46%) | 9 (69.23%) | 1 (7.69%) | 9 (69.23%) | 1 (7.69%) | 9 (69.23%) | 0 (0.00%) | 5 (38.46%) |
HECT (7) | 7 (100%) | 1 (14.29%) | 7 (100%) | 0 (0.00%) | 7 (100%) | 0 (0.00%) | 7 (100%) | 2 (28.57%) | 3 (42.86%) |
DDB (3) | 3 (100%) | 0 (0.00%) | 3 (100%) | 0 (0.00%) | 3 (100%) | 0 (0.00%) | 3 (100%) | 1 (33.33%) | 1 (33.33%) |
Total (765) | 479 (62.61%) | 113 (14.77%) | 488 (63.79%) | 68 (8.89%) | 490 (64.05%) | 64 (8.37%) | 480 (62.75%) | 137 (17.91%) | 231 (30.20%) |