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Fig. 4 | BMC Genomics

Fig. 4

From: Chromosome level assembly and comparative genome analysis confirm lager-brewing yeasts originated from a single hybridization

Fig. 4

Similarity profiles of the S. cerevisiae (sub-)genomes of various Saccharomyces strains, as determined using Alpaca for chromosomes Sc II and IV. Each S. cerevisiae chromosome of the CBS 1483 assembly was partitioned in non-overlapping sub-regions of 2 Kbp. The colors represent the most similar lineages based on k-mer similarity of 157 S. cerevisiae strains from Gallone et al [62]: Asia (blue), Beer1 (green), Beer2, (gold), Mixed (orange), West-Africa (purple), Wine (red). Mosaic strains are shown in black and ambiguous or low-similarity sub-regions in white. Similarity patterns are shown for the Group 2 S. pastorianus strains CBS 1483, CBS 2156, WS34/70 and Hei-A, for the Group 1 S. pastorianus strains CBS 1503, CBS 1513 and CBS 1538, for S. cerevisiae ale-brewing strains CBS 7539, CBS 1463, A81062, CBS 1171, CBS 6308 and CBS 1483, and for S. cerevisiae laboratory strains CEN.PK113-7D and S288C. Similarity profiles for all chromosomes in the S. cerevisiae (sub-)genomes are shown in Additional file 6: Figure S5

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BMC Genomics

ISSN: 1471-2164

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