Fig. 2
From: Spatial organization of endometrial gene expression at the onset of embryo attachment in pigs
Unsupervised clustering of endometrial LCM samples. Multidimensional scaling plots were generated in EdgeR for the genes showing the highest leading log-fold-changes between the samples in the dataset for LCM samples. Sample groups: CL (orange): cyclic, luminal epithelium; PL (dodgerblue): pregnant, luminal epithelium; CG (red): cyclic, glandular epithelium; PG (blue): pregnant, glandular epithelium; CB (purple): cyclic, blood vessels; PB (darkblue): pregnant, blood vessels; CS (brown): cyclic, stroma; PS (cyan): pregnant, stroma. a,b all LCM samples based on the 2000 genes with highest leading log-fold-changes (a) and on all detectable genes (b). c luminal epithelium samples. d glandular epithelium samples. e blood vessel samples. f stroma samples. c-f MDS plots based on the 500 genes with highest leading log-fold-changes. Red and Blue indicate samples from pregnant and cyclic groups, respectively