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Table 2 Association analysis of genotypes from the most significant SNP in each QTL region for RFI in Angus (B. Taurus UMD3.1)

From: Combining information from genome-wide association and multi-tissue gene expression studies to elucidate factors underlying genetic variation for residual feed intake in Australian Angus cattle

SNP

Position

A1a

A2b

Frc

-log10 (P)

%d

Effecte

rs42662073

20:4883142

B

A

0.45

8.98

4%

−0.26

rs137349090

17:63630684

A

B

0.34

4.91

2%

−0.19

rs42544395

14:24181858

A

B

0.08

4.89

2%

−0.34

rs42005099

1:110543274

A

B

0.49

4.68

2%

0.18

rs42322957

6:55181977

B

A

0.38

4.59

2%

0.19

rs133158056

26:8907239

A

B

0.049

4.45

2%

−0.39

  1. aA1: reference allele; bA2: other allele; cFr: MAF (minor allele frequency); dpercentage of variance explained by the genotype; eSNP effect
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BMC Genomics

ISSN: 1471-2164

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