Comparative genomics of eight Lactobacillus buchneri strains isolated from food spoilage

BMC Genomics

Table 1 Whole-genome assembly statistics for each of the eight sequenced Lactobacillus buchneri isolates

Strain	Source	Genome Size (bp)	Contigs	N50 (bp)	Max Contig Size (bp)	GC%	Coverage	Sequencing Technology	Accession
ATCC 4005	Tomato pulp	2,493,071	67	64,594	174,839	44.3	48x	Illumina HiSeq	VFBO00000000
LA1147	Reduced NaCl fermented cucumber spoilage	2,608,988	128	36,444	93,082	44.1	46x	Illumina HiSeq	VFBV00000000
LA1161B	Anaerobic reproduction of commercial fermented cucumber spoilage	2,614,519	77	63,881	177,214	44	45x	Illumina HiSeq	VFBU00000000
LA1161C	Anaerobic reproduction of commercial fermented cucumber spoilage	2,561,573	60	78,131	198,440	44.2	47x	Illumina HiSeq	VFBT00000000
LA1167	Anaerobic reproduction of commercial fermented cucumber spoilage	2,613,434	73	61,779	136,582	44.1	56x	Illumina HiSeq	VFBS00000000
LA1175D	Reduced NaCl fermented cucumber spoilage	2,673,869	117	46,669	152,307	44.1	100x	Illumina HiSeq	VFBR00000000
LA1181	Reduced NaCl fermented cucumber spoilage	2,628,753	59	95,113	208,049	44	46x	Illumina HiSeq	VFBQ00000000
LA1184	Reduced NaCl fermented cucumber spoilage	2,761,236	20	2,348,394	2,348,394	44	500x	Illumina HiSeq + PacBio	VFBP00000000

ISSN: 1471-2164