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Table 3 Rank comparison of multiple stress-responsive genes

From: StressGenePred: a twin prediction model architecture for classifying the stress types of samples and discovering stress-related genes in arabidopsis

Genename

GOTerm

Rank of our model

Rank of fisher method

AT2G47180

heat,cold

heat(243), cold(500)

heat(39), cold(164)

AT5G37770

heat,cold

heat(2007), cold(3414)

heat(1878), cold(2510)

AT5G57560

heat,cold

heat(1357), cold(1428)

heat(235), cold(627)

AT5G58070

heat,cold

heat(693), cold(111)

heat(258), cold(167)

AT5G59820

heat,cold

heat(1069), cold(512)

heat(234), cold(128)

AT2G47180

heat,salt

heat(243), salt(842)

heat(39), salt(722)

AT3G09350

heat,salt

heat(61), salt(1341)

heat(35), salt(1712)

AT1G01060

cold,salt

salt(1762), cold(1342)

salt(1578), cold(298)

AT2G17840

cold,salt

salt(120), cold(247)

salt(279), cold(34)

AT2G19450

cold,salt

salt(1201), cold(86)

salt(700), cold(162)

AT2G38470

cold,salt

salt(234), cold(4958)

salt(142), cold(3504)

AT2G42540

cold,salt

salt(257), cold(79)

salt(538), cold(23)

AT2G46830

cold,salt

salt(506), cold(267)

salt(338), cold(31)

AT2G47180

cold,salt

salt(842), cold(500)

salt(722), cold(1642)

AT3G23830

cold,salt

salt(2516), cold(3530)

salt(1590), cold(2493)

AT3G48360

cold,salt

salt(1007), cold(1968)

salt(111), cold(447)

AT5G23860

cold,salt

salt(1280), cold(320)

salt(2527), cold(449)

AT5G52300

cold,salt

salt(43), cold(2982)

salt(38), cold(1327)

AT5G52310

cold,salt

salt(10), cold(333)

salt(6), cold(4)

AT5G58670

cold,salt

salt(291), cold(2148)

salt(634), cold(1284)

AT4G02380

cold,drought

drought(1013), cold(416)

drought(136), cold(278)

  1. To investigate that StressGenePred excludes genes that respond to more than one stress, 21 genes known to respond to more than one stress are collected. Among the 21 genes, 13 genes rank lower in the result of StressGenePred than Fisher method (Table 3)