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Table 5 Top 10 prediction of LNPM-SC and SLNPM-PC for lncRNA “MALAT1” and miRNA “hsa-miR-17-5p”

From: LncRNA-miRNA interaction prediction through sequence-derived linear neighborhood propagation method with information combination

 

SLNPM-SC

SLNPM-PC

MALAT1

hsa-miR-17-5p

MALAT1

hsa-miR-17-5p

NO

miRNAs

Confirmed?

lncRNAs

Confirmed?

miRNAs

Confirmed?

lncRNAs

Confirmed?

1

hsa-miR-1

YES [52]

lnc-SNRPN-8

N.A.

hsa-miR-1

YES [52]

lnc-SNRPN-8

N.A.

2

hsa-miR-101-3p

YES [53]

KCNQ1OT1

N.A.

hsa-miR-101-3p

YES [53]

KCNQ1OT1

N.A.

3

hsa-miR-206

YES [54]

XIST

YES [55]

hsa-miR-142-3p

YES [56]

XIST

YES [55]

4

hsa-miR-210-3p

N.A.

lnc-COL9A2–1

N.A.

hsa-miR-206

YES [54]

lnc-COL9A2–1

N.A.

5

hsa-miR-216a-5p

YES [57]

lnc-ALYREF-1

N.A.

hsa-miR-210-3p

N.A.

lnc-ALYREF-1

N.A.

6

hsa-miR-329-3p

N.A.

COX10-AS1

YES [55]

hsa-miR-216a-5p

YES [57]

COX10-AS1

YES [55]

7

hsa-miR-335-5p

N.A.

lnc-NFAT5–2

N.A.

hsa-miR-335-5p

N.A.

lnc-NFAT5–2

N.A.

8

hsa-miR-3529-5p

N.A.

lnc-ACER2–1

YES [58]

hsa-miR-376b-3p

YES [52]

lnc-ACER2–1

YES [58]

9

hsa-miR-362-3p

N.A.

lnc-LUZP1–1

YES [55]

hsa-miR-455-5p

YES [59]

lnc-LUZP1–1

YES [55]

10

hsa-miR-376b-3p

YES [52]

lnc-NMRK1–1

N.A.

hsa-miR-876-5p

YES [52]

lnc-NMRK1–1

N.A.

  1. N.A not available.