Table 5 Effects of different traversal algorithms
From: A hybrid and scalable error correction algorithm for indel and substitution errors of long reads
Data | Methodology | #Reads | #Bases | #Aligned Reads | #Aligned bases | %Aligned reads | %Aligned bases |
|---|---|---|---|---|---|---|---|
E. coli | ParLECH WP | 282394 | 309367145 | 264574 | 285070391 | 93.69 | 92.15 |
| Â | ParLECH SP | 282394 | 307987923 | 247227 | 266373078 | 87.55 | 86.49 |
| Â | ParLECH Greedy | 282394 | 328966341 | 216543 | 233312807 | 76.68 | 70.92 |
Yeast | ParLECH WP | 231594 | 1389446261 | 199332 | 1240945939 | 86.07 | 89.31 |
| Â | ParLECH SP | 231594 | 1355153783 | 196669 | 1171490123 | 84.92 | 86.44 |
| Â | ParLECH Greedy | 231594 | 1399628927 | 175478 | 1045262567 | 75.77 | 74.68 |
Fruit fly | ParLECH WP | 6701498 | 30117416348 | 4417627 | 18799138439 | 65.92 | 62.42 |
| Â | ParLECH SP | 6701498 | 30193752318 | 3654326 | 14919815143 | 54.53 | 49.41 |
| Â | ParLECH Greedy | 6701498 | 32131749687 | 2946734 | 12030871508 | 43.97 | 37.44 |