Table 3 Performance comparisons of different GRN inference methods on the DREAM4 networks in terms of AUPR
From: D3GRN: a data driven dynamic network construction method to infer gene regulatory networks
Method | Network 1 | Network 2 | Network 3 | Network 4 | Network 5 |
|---|---|---|---|---|---|
GENIE3 | 0.161 | 0.154 | 0.234 | 0.211 | 0.200 |
TIGRESS | 0.158 | 0.161 | 0.233 | 0.225 | 0.233 |
NIMEFI | 0.157 | 0.157 | 0.248 | 0.225 | 0.241 |
PLSNET | 0.118 | 0.290 | 0.202 | 0.228 | 0.206 |
D3GRN | 0.175 | 0.136 | 0.253 | 0.255 | 0.247 |