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Table 3 Pearson correlation coefficients between UT-AIM250 and published panels of the AMR population

From: An ancestry informative marker panel design for individual ancestry estimation of Hispanic population using whole exome sequencing data

Panel

Population

PUR (n = 104)

CLM (n = 94)

PEL (n = 85)

MXL (n = 64)

All (n = 347)

Phillips-AIM34

AFR-AFR ρ

0.67 (P = 5.97 × 10− 15)

0.57 (P = 2.11 × 10− 9)

0.83 (P = 1.46 × 10− 22)

0.22 (P = 7.56 × 10− 2)

0.70 (P = 5.83 × 10− 52)

EUR-EUR ρ

0.69 (P = 9.72 × 10− 16)

0.67 (P = 9.39 × 10− 14)

0.57 (P = 1.60 × 10− 8)

0.81 (P = 4.09 × 10− 16)

0.83 (P = 7.30 × 10− 91)

EAS-EAS ρ

0.26 (P = 6.87 × 10− 3)

0.42 (P = 2.00 × 10− 5)

0.64 (P = 4.18 × 10− 11)

0.77 (P = 1.49 × 10− 13)

0.85 (P = 4.75 × 10− 96)

Wei-AIM278

AFR-AFR ρ

0.89 (P = 1.96 × 10− 37)

0.86 (P = 1.75 × 10− 28)

0.89 (P = 2.29 × 10− 30)

0.40 (P = 9.75 × 10− 4)

0.89 (P = 1.20 × 10− 122)

EUR-EUR ρ

0.80 (P = 1.74 × 10− 24)

0.84 (P = 1.55 × 10− 26)

0.83 (P = 6.24 × 10− 23)

0.92 (P = 1.24 × 10− 26)

0.93 (P = 1.60 × 10− 152)

EAS-EAS ρ

0.47 (P = 3.89 × 10− 7)

0.73 (P = 7.51 × 10− 17)

0.89 (P = 1.01 × 10− 29)

0.93 (P = 8.98 × 10− 29)

0.96 (P = 6.04 × 10− 193)

  1. Pearson correlation coefficient (p-value)
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BMC Genomics

ISSN: 1471-2164

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