Table 1 Studies that have classified gene regulatory divergence in genomes
Species | Tissue | Sex | Cis | Trans | Cis and trans | Conserved and ambiguous | Method | Citation |
|---|---|---|---|---|---|---|---|---|
Drosophila | Whole fly | Female | 12.4% | 30% | 35% | 22.6% | Hierarchical statistical analyses | McManus et al., 2010 |
Mouse | Liver | Male | 14% | 0.6% | 17.4% | 68% | Maximum likelihood based approach | Goncalves et al., 2012 |
Mouse | Testis | Male | 24% | 9% | 44% | 23% | Hierarchical statistical analyses | Crowley et al., 2015 |
Coffeaa | Leaf | Â | 15.5% | 18.5% | 17.5% | 48.0% | Hierarchical statistical analyses | Combes et al., 2015 |
14.5% | 18.3% | 16.6% | 50.6% | |||||
Chickenb | Brain | Female | 3.45% | 3.70% | 4.88% | 87.99% | Hierarchical statistical analyses | This article |
Male | 3.75% | 4.86% | 4.37% | 87.01% | ||||
Liver | Female | 7.41% | 12.92% | 16.15% | 63.53% | |||
Male | 8.31% | 13.93% | 17.07% | 60.70% | ||||
Muscle | Female | 5.60% | 15.80% | 10.79% | 67.82% | |||
Male | 4.72% | 16.73% | 11.58% | 66.99% |