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Table 1 Statistics of 47 available liverwort mitochondrial genomes. Taxa are sorted alphabetically. All ratios are calculated to the percentage of spacer length unless otherwise indicated. ORF = open reading frame; SSR = simple sequence repeat

From: Mitochondrial genomes of the early land plant lineage liverworts (Marchantiophyta): conserved genome structure, and ongoing low frequency recombination

Taxon

GenBank No.

Total spacer size (bp) (% of whole genome)

ORF (%)

Repeats (%)a

SSR (%)

Plastid origin (%)

Nuclear origin (%)b

Pseudogene (%)

Aneura pinguis

NC_026901

75,732 (45.73)

20.87

2.70

0.0

0

15.00

6.4

Aneura pinguis

KR817582

75,139 (45.54)

19.60

2.91

0.1

0

15.10

5.7

Aneura pinguis

KU140427

74,612 (45.48)

21.70

2.33

0.1

0

15.00

6.2

Aneura pinguis

KY242386

74,865 (45.46)

20.38

2.45

0.1

0

16.10

5.9

Aneura pinguis

KY702722

76,316 (46.01)

20.30

2.38

0.2

0

14.60

6.1

Aneura pinguis

KY702723

77,158 (46.19)

19.62

2.73

0.0

0

15.30

6.3

Aneura pinguis

MK230925

77,098 (46.19)

20.79

2.73

0.0

0

15.37

6.3

Bazzania japonica

MK230926

86,267 (53.05)

16.42

3.82

0.4

0

17.72

6.2

Bazzania tridens

MK318534

86,304 (53.06)

16.07

3.93

0.4

0

17.70

6.2

Blasia pusilla

MK230927

90,173 (48.76)

10.94

6.38

0.0

0

28.30

7.3

Calypogeia arguta

NC_035978

79,802 (50.17)

8.56

1.94

0.1

0

17.10

5.7

Calypogeia integristipula

NC_035977

82,607 (50.66)

13.16

3.56

0.1

0

19.00

6.7

Calypogeia neogaea

NC_035980

82,896 (51.12)

14.71

3.47

0.1

0

19.30

6.5

Calypogeia suecica

NC_035979

82,723 (51.08)

15.28

3.53

0.2

0

17.70

6.6

Conocephalum conicum

MK230928

91,366 (49.08)

12.35

6.09

0.1

0

28.93

6.3

Dumortiera hirsuta

MK230929

86,433 (48.56)

15.28

5.36

0.2

0

28.21

6.9

Fossombronia cristula

MK230936

85,625 (47.66)

14.22

4.25

0.1

0

20.98

6.6

Frullania orientalis

MK230937

75,479 (50.53)

12.11

4.34

0.3

0

19.59

4.4

Gymnomitrion concinnatum

NC_040132

80,799 (49.70)

11.92

3.93

0.1

0

18.20

5.3

Haplomitrium mnioides

MK230931

89,333 (49.96)

26.24

2.71

0.0

0

12.81

5.3

Haplomitrium mnioides

MK230932

89,333 (49.96)

26.24

2.71

0.0

0

12.81

5.3

Herbertus ramosus

MK230946

78,882 (49.82)

12.79

4.19

0.2

0

22.08

8.5

Heteroscyphus zollingeri

MK230947

79,048 (50.09)

12.92

2.52

0.3

0

16.37

6.4

Lepidozia trichodes

MK230954

87,006 (53.25)

20.83

3.53

0.2

0

15.78

6.7

Makinoa crispata

MK230958

81,459 (48.73)

19.35

6.61

0.1

0

24.83

7.3

Marchantia paleacea

NC_001660

91,942 (49.27)

14.04

7.61

0.1

0

30.90

7.0

Marchantia polymorpha subsp. ruderalis

NC_037508

91,328 (49.05)

12.53

7.61

0.1

0

30.79

7.1

Metacalypogeia alternifolia

MK230953

86,713 (51.99)

18.18

3.36

0.2

0

17.70

7.3

Metzgeria leptoneura

MK230956

80,637 (47.11)

18.08

3.70

0.1

0

18.26

6.6

Monosolenium tenerum

MK230931

92,474 (49.29)

15.15

6.82

0.1

0

29.42

6.8

Monosolenium tenerum

MK230932

92,476 (49.29)

15.15

6.80

0.1

0

29.42

6.8

Nowellia curvifolia

MK230952

61,971 (41.83)

11.66

2.93

0.1

0

14.34

6.7

Odontoschisma grosseverrucosum

MK230951

70,494 (45.28)

17.43

3.08

0.2

0

16.56

6.6

Plagiochila subtropica

MK230948

82,736 (51.26)

14.44

3.21

0.3

0

17.17

6.5

Pleurozia purpurea

MK230956

77,352 (45.90)

16.28

4.20

0.1

0

20.48

7.3

Pleurozia purpurea

NC_013444

77,347 (45.90)

15.81

4.19

0.1

0

20.50

7.3

Plicanthus hirtellus

MK230959

72,309 (49.32)

16.99

4.38

0.2

0

19.87

6.8

Porella plumosa

MK230938

88,966 (49.80)

16.81

5.63

0.1

0

21.08

6.6

Radula japonica

MK230939

73,160 (48.90)

20.68

4.42

0.3

0

15.13

5.7

Riccardia latifrons

MK230955

61,901 (41.62)

16.47

2.30

0.2

0

15.86

6.0

Riccardia planiflora

MK318535

62,537 (41.87)

18.13

1.89

0.11

0

14.90

5.1

Riccia cavernosa

MK230934

92,483 (49.23)

12.37

6.77

0.1

0

29.45

6.4

Scapania ornithopodioides

MK230950

68,944 (48.22)

11.81

3.40

0.1

0

17.42

7.3

Treubia lacunosa

NC_016122

71,724 (47.45)

16.60

2.32

0.0

0

18.55

6.1

Treubia lacunosa

MK230943

72,567 (47.75)

15.50

2.26

0.0

0

18.60

6.1

Trichocolea tomentella

MK230949

89,913 (51.74)

16.73

3.62

0.8

0

18.75

6.3

Tritomaria quinquedentata

MG640570

69,393 (48.69)

15.19

3.10

0.2

0

21.10

6.2

  1. aRepeated sequences were detected by BLASTN, and sequences with similarity higher than 85% and aligned length longer than 50 bp were considered as repeat
  2. bPutative nuclear-derived sequences were detected by blasting the whole-intergenic spacer of each species against the Marchantia polymorpha nuclear genome; blast hits with E value 0.00001 were summarized. For length calculation, overlapping regions in mitochondrial spacers were removed