Table 5 Genes description in enriched pathways from “greenyellow” module (p < 0.05)
Pathway | DEGs in pathway | Gene ID | Annotation |
|---|---|---|---|
Oxidative phosphorylation | 22 (6.23%) | GENE_024356 | ATP synthase gamma chain |
GENE_019595 | NADH dehydrogenase subunit 10 | ||
Photosynthesis - antenna proteins | 18 (5.1%) | GENE_022269 | Light harvesting protein lhcf6 |
Photosynthesis | 9 (2.55%) | GENE_014910 | Photosystem II 12 kDa extrinsic protein |
Circadian rhythm - plant | 5 (1.42%) | GENE_003847 | Cryptochrome 3 |
GENE_017333 | Phytochrome-like protein 3 | ||
Carotenoid biosynthesis | 7 (1.98%) | GENE_000415 | Zeta-carotene desaturase |
GENE_021497 | Lycopene beta cyclase | ||
GENE_027759 | Cytochrome P450 | ||
GENE_017807 | Violaxanthin de-epoxidase | ||
GENE_006795 | Flavoprotein Monooxygenase | ||
Carbon fixation in photosynthetic organisms | 12 (3.4%) | GENE_000154 | Phosphoglycerate kinase |
GENE_008411 | Fructose-bisphosphatase | ||
GENE_002455 | Malate dehydrogenase |