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Fig. 4 | BMC Genomics

Fig. 4

From: Comparative population genomics reveals genetic divergence and selection in lotus, Nelumbo nucifera

Fig. 4

Examples of seven genes with strong signals of a selective sweep in cultivated lotus. Figure A, B, C, D, E, F and G correspond to the SUPERMAN-like gene(XM_010264184.1), legumin A-like gene(XM_010281131.1), 3-oxo-Δ 4,5-steroid 5β-reductase gene(XM_010274509.1), EFR gene(XM_010270240.1), UGT80B1 gene (XM_010262670.1), EMBRYONIC FLOWER 2-like gene (XM_010260462.1) and expansin-A13-like gene (XM_010247895.1) respectively. The abscissa of each figures are the physical distance. The left ordinate is the fstM value and the right ordinate is the pi value; pi-1, pi-2 and fstM values are presented in pink, green and blue and the red rectangles show the gene position. In the first column of the graph, the pi-1 and pi-2 stand for the pi values of the selected genes of flower lotus and wild lotus respectively; the pi-1 and pi-2 stand for the pi values of rhizome lotus and wild lotus respectively in the second column and the pi-1 and pi-2 stand for the pi values of wild lotus and seed lotus respectively in the third column

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