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Fig. 1 | BMC Genomics

Fig. 1

From: Genome sequence of Pseudomonas aeruginosa PAO1161, a PAO1 derivative with the ICEPae1161 integrative and conjugative element

Fig. 1

Comparison of P. aeruginosa PAO1161 and PAO1-UW genomes. a Origin of P. aeruginosa PAO1161 strain. b A subsection of the phylogenetic tree of P. aeruginosa strains deposited at NCBI showing selected strains closely related to PAO1161. The tree was constructed using a Tree View option from the NCBI Web BLAST service [17]. The analysed genomes are listed in Additional file 1: Table S1. c Major structural variations between the genomes of the two P. aeruginosa strains. Whole genome alignment and synteny visualization was performed with EasyFig [18]. Blocks indicate regions with percentage of nucleotide sequence identity higher than 95%. The inversion between rrnA and rrnB rRNA operons is coloured in yellow. Bottom panel indicates positions and schematic gene organization of large insertions: ICEPae1161 and RGP42. D3C65_ in the locus IDs of PAO1161 genes was removed for clarity

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BMC Genomics

ISSN: 1471-2164

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