Skip to main content
Fig. 2 | BMC Genomics

Fig. 2

From: Exploring the changing landscape of cell-to-cell variation after CTCF knockdown via single cell RNA-seq

Fig. 2

Systematic difference between CTCF-KD and WT cells. a. No significant batch effect among the experimental repeats based on PCA analysis. b. CTCF-KD cells were largely distinguishable from WT cells on PCA projection. c. Distribution of individual WT cells and individual CTCF-KD cells on PC1. d. Heatmap of differentially expressed genes (TOP 20) between WT cells and CTCF-KD cells

Back to article page